Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015929495.1_cds_XP_016476771.1_68567
CDS Infomation

[gene=LOC107798312] [db_xref=GeneID:107798312] [protein=DUF21 domain-containing protein At4g14240-like isoform X2] [protein_id=XP_016476771.1] [location=complement(join(104256..104267,104358..104439,104527..104573,104665..105022,105105..105178,105265..105352,108886..108953,109517..109588,109708..109791,111344..111457,111546..111629,112253..112329,112507..112747))] [gbkey=CDS]
Sequence

ATGCACCTGTTCAATGCGGCGGCAGTTGTTCGAATGGCAACGAGGTGTCATTCGAACCCT
GGCCTGGGGGCAGAAATAGCATTTGGGACGGTGTCATGGTTCCTCTACGCTGGTATCTCT
TGTTTTTTAGTACTCTTCGCCGGCATTATGTCCGGTTTGACATTGGGCCTCATGTCTTTG
GGTCTCGTCGAACTTGAGATCCTTCAACGAAGTGGCACCCCCTCTGAGAAAAAACAAGCT
GCTACGATACTTCCTGTTGTTCAGAAGCAACATCAGCTTCTTGTGACTCTACTTCTGTGT
AATGCTGCTGCTATGGAGGCCCTGCCTCTATACCTGGATAAGCTTTTCAACCAATATGTT
GCCATTATACTATCAGTAACTTTTGTTTTGTTTTTTGGAGAGGTTATTCCTCAAGCAATA
TGCACCAGATATGGACTTGCAGTAGGTTCAAATTTTGTTTGGCTTGTTCGTATTCTGATG
ATCATATGCTACCCAATTTCTTACCCCATCGGGAAGATCCTAGACTGTGTATTGGGACAT
AATGAAGTACTATTTAGACGAGCTCAGTTAAAAGCCCTTGTCTCTATCCACAGTCGAGAG
GCTGGCAAGGGAGGTGATCTTACACATGATGAGACAACAATCATTAGTGGAGCACTGGAT
TTAACTGAGAAGACTGCTGAGGAGGCTATGACACCCATCGAGTCAACATTTTCATTGGAT
GTCAATTCAAAGCTGGACTGGGAGGCAATGGGAAAAATTCTTGCTCGGGGTCATAGTCGT
GTTCCTGTCTACTCTGGCAATCCAAAGAATGTTATTGGACTTCTACTTGTAAAAAGTCTT
CTGACAGTACGGGCCGAAACAGAGACACCAGTTAGTGCAGTTTCTATTCGCAGAATTCCA
CGTGTTCCTGCTGATATGCCGCTATATGACATACTAAATGAGTTTCAGAAAGGTAGCAGT
CATATGGCTGCAGTGGTGAAGGCTAAAGGGAAAAGCAAAAAGCCTCCCTCAGTAGTTGAG
GAACAGAAGTCTGAAGACAATGAAGTCACCAGTGAAGCTGCTCCTCTTCTGATGAAAAAG
GATGGAAAATCAGATAATGTCGTCGTTGATATTGAGAAGGCTACAGTGCCAGCAGCGATA
AGCACACCAACATCTGGTGATGCAGTGACAAATAGTGTGGCTCATTCATTAGATGATATT
GAGGATGCTGAAGTTATTGGTATTATCACCTTGGAAGATGTATTCGAAGAATTGCTACAG
GAGGAAATTGTGGATGAGACCGATGAGTATGTTGATGTACATAAAAGGATTCGTGTGGCA
GCAGCAGCAGCTGCTTCATCAGTAGCACGAGCTCCATCAATCCGGAGGTTGACAGCCCAA
AAGGCAGCTGCACGAACTTGA

Peptide Sequence

PEP ID

XP_016476771.1
PEP Infomation

PREDICTED: DUF21 domain-containing protein At4g14240-like isoform X2 [Nicotiana tabacum]
Sequence

MHLFNAAAVVRMATRCHSNPGLGAEIAFGTVSWFLYAGISCFLVLFAGIMSGLTLGLMSL
GLVELEILQRSGTPSEKKQAATILPVVQKQHQLLVTLLLCNAAAMEALPLYLDKLFNQYV
AIILSVTFVLFFGEVIPQAICTRYGLAVGSNFVWLVRILMIICYPISYPIGKILDCVLGH
NEVLFRRAQLKALVSIHSREAGKGGDLTHDETTIISGALDLTEKTAEEAMTPIESTFSLD
VNSKLDWEAMGKILARGHSRVPVYSGNPKNVIGLLLVKSLLTVRAETETPVSAVSIRRIP
RVPADMPLYDILNEFQKGSSHMAAVVKAKGKSKKPPSVVEEQKSEDNEVTSEAAPLLMKK
DGKSDNVVVDIEKATVPAAISTPTSGDAVTNSVAHSLDDIEDAEVIGIITLEDVFEELLQ
EEIVDETDEYVDVHKRIRVAAAAAASSVARAPSIRRLTAQKAAART

Transcript Sequence

Gene sequence data has not been registered.